Recently published apps

We’ve just published four tools from the OncoGEMINI 1.0.0 toolkit:

• OncoGEMINI Bottleneck that identifies somatic variants with increasing allele frequency in longitudinal data.

• OncoGEMINI Loh, a command tool that performs loss of heterozygosity analysis.

• OncoGEMINI Truncal that recovers variants that appear in all tumor samples, but are absent in the normal sample.

• OncoGEMINI Unique tool for identifying somatic variants unique to a subset of samples.

Marko Marinkovic